Index

_

__deepcopy__() (BlackDynamite.zeoobject.ZEOObject method) __enter__() (BlackDynamite.loader.Loader method) __exit__() (BlackDynamite.loader.Loader method) __getitem__() (BlackDynamite.bdlogging.ExtraContext method) (BlackDynamite.conffile_zeo.ConfFile method) __getstate__() (BlackDynamite.zeoobject.ZEOObject method) __iadd__() (BlackDynamite.bd_constraints.BDconstraints method)

__iter__() (BlackDynamite.bdlogging.ExtraContext method) __repr__() (BlackDynamite.scripts.fix_zeodb.Command method) (BlackDynamite.scripts.open_zeodb.Command method) (BlackDynamite.zeoobject.ZEOObject method) __setattr__() (BlackDynamite.zeoobject.ZEOObject method) __setitem__() (BlackDynamite.conffile_zeo.ConfFile method) __setstate__() (BlackDynamite.zeoobject.ZEOObject method)

A

activateFileLogging() (in module BlackDynamite.bdlogging) addConfigFiles() (BlackDynamite.run_zeo.RunZEO method) (BlackDynamite.runLM.RunLM method) addEnvBDArguments() (BlackDynamite.bdparser.BDParser method) addFile() (in module BlackDynamite.conffile_zeo) admissible_params (in module BlackDynamite.coating.pbsCoat) (in module BlackDynamite.coating.sgeCoat) (in module BlackDynamite.coating.slurmCoat)

args (in module BlackDynamite.scripts.createUser), [1] attachToJob() (BlackDynamite.run_zeo.RunZEO method) (BlackDynamite.runLM.RunLM method) average() (BlackDynamite.BDstat.BDStat method) averageVector() (BlackDynamite.BDstat.BDStat method)

B

base (BlackDynamite.zeoobject.ZEOObject property) Base() (in module BlackDynamite.base) BaseZEO (class in BlackDynamite.base_zeo) BD_FORMAT (in module BlackDynamite.bdlogging) BDCompleter (class in BlackDynamite.scripts.canYouDigIt) BDconstraints (class in BlackDynamite.bd_constraints) BDParser (class in BlackDynamite.bdparser) BDStat (class in BlackDynamite.BDstat) BlackDynamite module BlackDynamite.base module BlackDynamite.base_zeo module BlackDynamite.bd_constraints module BlackDynamite.bdlogging module BlackDynamite.bdparser module BlackDynamite.BDstat module BlackDynamite.coating module BlackDynamite.coating.bashCoat module BlackDynamite.coating.pbsCoat module BlackDynamite.coating.sgeCoat module BlackDynamite.coating.slurmCoat module BlackDynamite.conffile_zeo module BlackDynamite.constraints_zeo module BlackDynamite.graphhelper module BlackDynamite.job module BlackDynamite.jobselector module BlackDynamite.loader module BlackDynamite.lowercase_btree module BlackDynamite.run_zeo module BlackDynamite.runLM module

BlackDynamite.runselector module BlackDynamite.scripts module BlackDynamite.scripts.bd_zeo_server module BlackDynamite.scripts.canYouDigIt module BlackDynamite.scripts.cleanRuns module BlackDynamite.scripts.createDB module BlackDynamite.scripts.createJobs module BlackDynamite.scripts.createRuns module BlackDynamite.scripts.createUser module BlackDynamite.scripts.enterRun module BlackDynamite.scripts.fix_zeodb module BlackDynamite.scripts.getJobInfo module BlackDynamite.scripts.getRunInfo module BlackDynamite.scripts.launchRuns module BlackDynamite.scripts.mvRuns module BlackDynamite.scripts.open_zeodb module BlackDynamite.scripts.plotRuns module BlackDynamite.scripts.pushQuantity module BlackDynamite.scripts.saveBDStudy module BlackDynamite.scripts.studyInfo module BlackDynamite.scripts.updateRuns module BlackDynamite.selector module BlackDynamite.zeoobject module BTree (in module BlackDynamite.lowercase_btree) (in module BlackDynamite.zeoobject) buildConnection() (BlackDynamite.base_zeo.BaseZEO method)

C

check_types() (in module BlackDynamite.scripts.fix_zeodb) checkActualConfig() (BlackDynamite.base_zeo.BaseZEO method) clean_debug_filestream() (in module BlackDynamite.scripts.canYouDigIt) clean_job_entries() (in module BlackDynamite.scripts.fix_zeodb) clean_run_entries() (in module BlackDynamite.scripts.fix_zeodb) cleanUnsetParams() (BlackDynamite.bdparser.BDParser method) close() (BlackDynamite.base_zeo.BaseZEO method) collect_completions() (BlackDynamite.scripts.canYouDigIt.BDCompleter method) Command (class in BlackDynamite.scripts.fix_zeodb) (class in BlackDynamite.scripts.open_zeodb) commit() (BlackDynamite.base_zeo.BaseZEO method) (BlackDynamite.zeoobject.ZEOObject method) (in module BlackDynamite.scripts.fix_zeodb) (in module BlackDynamite.scripts.open_zeodb)

completer() (BlackDynamite.bdparser.BDParser method) ConfFile (class in BlackDynamite.conffile_zeo) configfiles (BlackDynamite.base_zeo.BaseZEO property) copy() (BlackDynamite.zeoobject.ZEOObject method) createArgumentParser() (BlackDynamite.bdparser.BDParser method) createBase() (BlackDynamite.base_zeo.BaseZEO method) createLaunchFile() (BlackDynamite.runLM.RunLM method) createSchema() (BlackDynamite.base_zeo.BaseZEO method) createSocket() (BlackDynamite.base_zeo.BaseZEO method) createTableRequest() (BlackDynamite.zeoobject.ZEOObject method) createUser() (in module BlackDynamite.scripts.createUser) createZEOconfig() (BlackDynamite.base_zeo.BaseZEO method)

D

declareArguments() (BlackDynamite.bdparser.BDParser method) (BlackDynamite.bdparser.RunParser method) (BlackDynamite.graphhelper.GraphParser method) declareModuleArguments() (BlackDynamite.bdparser.BDParser method)

decorateGraph() (BlackDynamite.graphhelper.GraphHelper method) default_params (in module BlackDynamite.coating.pbsCoat) (in module BlackDynamite.coating.slurmCoat) delete() (BlackDynamite.run_zeo.RunZEO method) deleteData() (BlackDynamite.run_zeo.RunZEO method)

E

error() (BlackDynamite.bdparser.BDParser method)

evalFunctorEntries() (BlackDynamite.zeoobject.ZEOObject method) ExtraContext (class in BlackDynamite.bdlogging)

F

fetchInfo() (in module BlackDynamite.scripts.studyInfo) fetchStudy() (in module BlackDynamite.scripts.studyInfo) finish() (BlackDynamite.run_zeo.RunZEO method)

fname() (BlackDynamite.bdlogging.ExtraContext method) foo() (BlackDynamite.bdlogging.ExtraContext method) formatTimeDelta() (in module BlackDynamite.scripts.getRunInfo)

G

generateLabels() (BlackDynamite.graphhelper.GraphHelper method) generatePassword() (in module BlackDynamite.scripts.createUser) get_keys() (BlackDynamite.zeoobject.ZEOObject method) get_params() (BlackDynamite.run_zeo.RunZEO method) (BlackDynamite.zeoobject.ZEOObject method) getAllVectorQuantity() (BlackDynamite.run_zeo.RunZEO method) getConfigFile() (BlackDynamite.run_zeo.RunZEO method) getConfigFiles() (BlackDynamite.run_zeo.RunZEO method) getExecFile() (BlackDynamite.run_zeo.RunZEO method) getFile() (BlackDynamite.run_zeo.RunZEO method) getFullFileName() (BlackDynamite.run_zeo.RunZEO method) getInfoNames() (in module BlackDynamite.scripts.getRunInfo) getJob() (BlackDynamite.run_zeo.RunZEO method) getJobInfo() (in module BlackDynamite.scripts.getJobInfo) getJobInfos() (in module BlackDynamite.scripts.getJobInfo) getLastStep() (BlackDynamite.run_zeo.RunZEO method) getLogger() (in module BlackDynamite.bdlogging) getMatchedObjectList() (BlackDynamite.zeoobject.ZEOObject method) getMatchingCondition() (BlackDynamite.constraints_zeo.ZEOconstraints method)

getMeasures() (BlackDynamite.graphhelper.GraphHelper method) getQuantityArrayFromBlob() (BlackDynamite.run_zeo.RunZEO method) getQuantityBlob() (BlackDynamite.run_zeo.RunZEO method) getRunFromScript() (in module BlackDynamite.run_zeo) getRunInfo() (in module BlackDynamite.scripts.getRunInfo) getRunInfos() (in module BlackDynamite.scripts.getRunInfo) getScalarQuantities() (BlackDynamite.run_zeo.RunZEO method) getScalarQuantity() (BlackDynamite.run_zeo.RunZEO method) getSchemaList() (BlackDynamite.base_zeo.BaseZEO method) getSchemasUser() (BlackDynamite.base_zeo.BaseZEO method) (in module BlackDynamite.scripts.open_zeodb) getSocketName() (BlackDynamite.base_zeo.BaseZEO method) getStudySize() (BlackDynamite.base_zeo.BaseZEO method) getTimeInfos() (in module BlackDynamite.scripts.getRunInfo) getTr() (BlackDynamite.bdlogging.ExtraContext static method) getUpdatedConfigFile() (BlackDynamite.run_zeo.RunZEO method) getVectorQuantity() (BlackDynamite.run_zeo.RunZEO method) GraphHelper (class in BlackDynamite.graphhelper) GraphParser (class in BlackDynamite.graphhelper)

H

help (in module BlackDynamite.coating.pbsCoat) (in module BlackDynamite.coating.sgeCoat) (in module BlackDynamite.coating.slurmCoat)

host (in module BlackDynamite.scripts.createUser)

I

insert() (BlackDynamite.base_zeo.BaseZEO method)

invalidPrint() (in module BlackDynamite.bdlogging)

J

Job (BlackDynamite.base_zeo.BaseZEO property) jobs (BlackDynamite.base_zeo.BaseZEO property) jobs_counter (BlackDynamite.base_zeo.BaseZEO property)

jobs_index (BlackDynamite.base_zeo.BaseZEO property) JobSelector (class in BlackDynamite.jobselector) JobZEO (class in BlackDynamite.job)

L

launch() (in module BlackDynamite.coating.bashCoat) (in module BlackDynamite.coating.pbsCoat) (in module BlackDynamite.coating.sgeCoat) (in module BlackDynamite.coating.slurmCoat) launchRuns() (BlackDynamite.base_zeo.BaseZEO method) launchZdaemon() (BlackDynamite.base_zeo.BaseZEO method) listFiles() (BlackDynamite.run_zeo.RunZEO method) listPossibleConf() (BlackDynamite.bdparser.BDParser method) listPossibleHosts() (BlackDynamite.bdparser.BDParser method) listPossibleModules() (BlackDynamite.bdparser.BDParser method)

listQuantities() (BlackDynamite.run_zeo.RunZEO method) Loader (class in BlackDynamite.loader) loader (in module BlackDynamite.loader) loadModule() (BlackDynamite.bdparser.BDParser method) logger (in module BlackDynamite.bd_constraints) (in module BlackDynamite.constraints_zeo) (in module BlackDynamite.job) (in module BlackDynamite.lowercase_btree) (in module BlackDynamite.selector) (in module BlackDynamite.zeoobject) lololo() (BlackDynamite.bdlogging.ExtraContext method)

M

machine_dst (in module BlackDynamite.scripts.mvRuns) main() (in module BlackDynamite.scripts.bd_zeo_server) (in module BlackDynamite.scripts.cleanRuns) (in module BlackDynamite.scripts.createDB) (in module BlackDynamite.scripts.createJobs) (in module BlackDynamite.scripts.createRuns) (in module BlackDynamite.scripts.enterRun) (in module BlackDynamite.scripts.fix_zeodb) (in module BlackDynamite.scripts.getJobInfo) (in module BlackDynamite.scripts.getRunInfo) (in module BlackDynamite.scripts.launchRuns) (in module BlackDynamite.scripts.open_zeodb) (in module BlackDynamite.scripts.plotRuns) (in module BlackDynamite.scripts.pushQuantity) (in module BlackDynamite.scripts.saveBDStudy) (in module BlackDynamite.scripts.studyInfo) (in module BlackDynamite.scripts.updateRuns) main_PYTHON_ARGCOMPLETE_OK() (in module BlackDynamite.scripts.canYouDigIt) make_command() (in module BlackDynamite.scripts.fix_zeodb) (in module BlackDynamite.scripts.open_zeodb) makeComposedQuantity() (BlackDynamite.graphhelper.GraphHelper method) makeCurve() (BlackDynamite.graphhelper.GraphHelper method) makeGraphs() (BlackDynamite.graphhelper.GraphHelper method) mandatory (in module BlackDynamite.coating.slurmCoat) manualLaunch() (BlackDynamite.base_zeo.BaseZEO method) matchConstraint() (BlackDynamite.zeoobject.ZEOObject method) module BlackDynamite BlackDynamite.base BlackDynamite.base_zeo BlackDynamite.bd_constraints BlackDynamite.bdlogging BlackDynamite.bdparser BlackDynamite.BDstat BlackDynamite.coating BlackDynamite.coating.bashCoat BlackDynamite.coating.pbsCoat BlackDynamite.coating.sgeCoat BlackDynamite.coating.slurmCoat BlackDynamite.conffile_zeo BlackDynamite.constraints_zeo BlackDynamite.graphhelper BlackDynamite.job BlackDynamite.jobselector BlackDynamite.loader BlackDynamite.lowercase_btree BlackDynamite.run_zeo BlackDynamite.runLM BlackDynamite.runselector BlackDynamite.scripts BlackDynamite.scripts.bd_zeo_server BlackDynamite.scripts.canYouDigIt BlackDynamite.scripts.cleanRuns BlackDynamite.scripts.createDB BlackDynamite.scripts.createJobs BlackDynamite.scripts.createRuns BlackDynamite.scripts.createUser BlackDynamite.scripts.enterRun BlackDynamite.scripts.fix_zeodb BlackDynamite.scripts.getJobInfo BlackDynamite.scripts.getRunInfo BlackDynamite.scripts.launchRuns BlackDynamite.scripts.mvRuns BlackDynamite.scripts.open_zeodb BlackDynamite.scripts.plotRuns BlackDynamite.scripts.pushQuantity BlackDynamite.scripts.saveBDStudy BlackDynamite.scripts.studyInfo BlackDynamite.scripts.updateRuns BlackDynamite.selector BlackDynamite.zeoobject

move_run() (in module BlackDynamite.scripts.mvRuns) mybase (in module BlackDynamite.scripts.mvRuns)

N

new_user (in module BlackDynamite.scripts.createUser)

P

pack() (BlackDynamite.base_zeo.BaseZEO method) params (in module BlackDynamite.scripts.mvRuns) parse() (BlackDynamite.constraints_zeo.ZEOconstraintsParser method) parseBDParameters() (BlackDynamite.bdparser.BDParser method) (BlackDynamite.bdparser.RunParser method) (BlackDynamite.runLM.RunLMParser method) parseModuleName() (BlackDynamite.bdparser.BDParser method) parser (in module BlackDynamite.scripts.createUser) (in module BlackDynamite.scripts.mvRuns) PBTree (in module BlackDynamite.zeoobject) PersistentLowerCaseBTree (class in BlackDynamite.lowercase_btree) prepare() (BlackDynamite.base_zeo.BaseZEO method) print (in module BlackDynamite.bd_constraints) (in module BlackDynamite.constraints_zeo) (in module BlackDynamite.job) (in module BlackDynamite.lowercase_btree) (in module BlackDynamite.selector) (in module BlackDynamite.zeoobject)

print_full_run_info() (in module BlackDynamite.scripts.enterRun) printDataBaseInfo() (in module BlackDynamite.scripts.studyInfo) printStudyInfo() (in module BlackDynamite.scripts.studyInfo) printSummary() (in module BlackDynamite.scripts.getRunInfo) printUserInfo() (in module BlackDynamite.scripts.studyInfo) pushConditionFromString() (BlackDynamite.constraints_zeo.ZEOconstraints method) pushConditionFromZEOObject() (BlackDynamite.constraints_zeo.ZEOconstraints method) pushScalarQuantities() (BlackDynamite.run_zeo.RunZEO method) pushScalarQuantity() (BlackDynamite.run_zeo.RunZEO method) pushVectorQuantity() (BlackDynamite.run_zeo.RunZEO method)

Q

quantities (BlackDynamite.base_zeo.BaseZEO property)

R

readConfFile() (BlackDynamite.bdparser.BDParser method) readConfFiles() (BlackDynamite.bdparser.BDParser method) reconstruct_indexes() (in module BlackDynamite.scripts.fix_zeodb) register_group() (BlackDynamite.bdparser.BDParser method) register_param() (in module BlackDynamite.coating.bashCoat) replaceBlackDynamiteVariables() (BlackDynamite.run_zeo.RunZEO method) replaceRunAndJobsParameters() (BlackDynamite.graphhelper.GraphHelper method) retreiveSchemaName() (BlackDynamite.base_zeo.BaseZEO method) (in module BlackDynamite.scripts.open_zeodb) root_logger (in module BlackDynamite.bdlogging)

Run (BlackDynamite.base_zeo.BaseZEO property) run_list (in module BlackDynamite.scripts.mvRuns) RunLM (class in BlackDynamite.runLM) RunLMParser (class in BlackDynamite.runLM) RunParser (class in BlackDynamite.bdparser) runs (BlackDynamite.base_zeo.BaseZEO property) runs_counter (BlackDynamite.base_zeo.BaseZEO property) runs_index (BlackDynamite.base_zeo.BaseZEO property) RunSelector (class in BlackDynamite.runselector) runSelector (in module BlackDynamite.scripts.mvRuns) RunZEO (class in BlackDynamite.run_zeo)

S

saveQuantityArrayToBlob() (BlackDynamite.run_zeo.RunZEO method) saveSchema() (in module BlackDynamite.scripts.saveBDStudy) saveStepTimeStamp() (BlackDynamite.run_zeo.RunZEO method) select() (BlackDynamite.base_zeo.BaseZEO method) selectGraphs() (BlackDynamite.graphhelper.GraphHelper method) selectJobs() (BlackDynamite.jobselector.JobSelector method) Selector (class in BlackDynamite.selector) selectRuns() (BlackDynamite.runselector.RunSelector method) setBinaryOperator() (BlackDynamite.graphhelper.GraphHelper method) setConfHost() (BlackDynamite.base_zeo.BaseZEO method) setConfPaths() (BlackDynamite.base_zeo.BaseZEO method) setConstraints() (BlackDynamite.graphhelper.GraphHelper method)

setExecFile() (BlackDynamite.run_zeo.RunZEO method) setFields() (BlackDynamite.zeoobject.ZEOObject method) setObjectItemTypes() (BlackDynamite.base_zeo.BaseZEO method) setQuantity() (BlackDynamite.graphhelper.GraphHelper method) sh (in module BlackDynamite.bdlogging) show() (BlackDynamite.graphhelper.GraphHelper method) singleton_base (BlackDynamite.base_zeo.BaseZEO attribute) start() (BlackDynamite.loader.Loader method) (BlackDynamite.run_zeo.RunZEO method) statusZdaemon() (BlackDynamite.base_zeo.BaseZEO method) stop() (BlackDynamite.loader.Loader method) stopZdaemon() (BlackDynamite.base_zeo.BaseZEO method)

T

table_name (BlackDynamite.conffile_zeo.ConfFile attribute) (BlackDynamite.job.JobZEO attribute)

U

UnknownVariable

update() (BlackDynamite.zeoobject.ZEOObject method) updatePossibleHosts() (BlackDynamite.bdparser.BDParser method)

V

validate() (in module BlackDynamite.scripts.cleanRuns)

Z

ZEOconstraints (class in BlackDynamite.constraints_zeo)

ZEOconstraintsParser (class in BlackDynamite.constraints_zeo) ZEOObject (class in BlackDynamite.zeoobject)